Publications
Weakly Supervised Learning using Attention gates for colon cancer histopathological image segmentation
Hamida, A. B., Devanne, M., Weber, J., Truntzer, C., Derangère, V., Ghiringhelli, F., Forestier, G. & Wemmert, C. (2022). Weakly Supervised Learning using Attention gates for colon cancer histopathological image segmentation. Artificial Intelligence in Medicine, September 2022, 102407.
[Ensemble clustering for histopathological images segmentation using convolutional
autoencoders](https://www.scitepress.org/Link.aspx?doi=10.5220/0010835300003124) Rmouque, I., Devanne, M., Weber, F., Forestier, G. & Wemmert, C. (2022). Ensemble clustering for histopathological images segmentation using convolutional autoencoders. VISIGRAPP (4: VISAPP), pp. 933-940, February 2022.
Deep learning for colon cancer histopathological images analysis
Hamida, A. B., Devanne, M., Weber, J., Truntzer, C., Derangère, V., Ghiringhelli, F., Forestier, G. & Wemmert, C. (2021). Deep learning for colon cancer histopathological images analysis. Computers in Biology and Medicine, 136, 104730.
Previous publications of the partners related to the project
- Crowdsourcing of Histological Image Labeling and Object Delineation by Medical Students. A. Grote et al. IEEE Trans. Med. Imaging 38(5): 1284-1294 (2019)
- Image analysis of immune cell patterns in the human mammary gland during the menstrual cycle refines lymphocytic lobulitis. N. Schaadt et al. Breast Cancer Res Treat 164 (2), 305-315. 2017 Apr 25
- In-silico insights on the prognostic potential of immune cell infiltration patterns in the breast lobular epithelium. J. Alfonso et al. Scientific Reports, Volume 6 - 2016
- Detection of lobular structures in normal breast tissue. G. Apou et al. Computers in Biology and Medicine, Elsevier, Volume 74, 91-102 - 2016
- RAS status and neoadjuvant chemotherapy impact CD8+ cells and tumor HLA class I expression in liver metastatic colorectal cancer. F. Ledys et al. J Immunother Cancer. 2018 Nov 19;6(1):123.
- Prognostic and predictive role of CD8 and PD-L1 determination in lung tumor tissue of patients under anti-PD-1 therapy. J. D. Fumet et al. Br J Cancer. 2018 Oct;119(8):950-960.
- Fluorouracil and bevacizumab plus anakinra for patients with metastatic colorectal cancer refractory to standard therapies (IRAFU): a single-arm phase 2 study. N. Isambert et al. Oncoimmunology. 2018 Aug 1;7(9):e1474319.
- Exome Analysis Reveals Genomic Markers Associated with Better Efficacy of Nivolumab in Lung Cancer Patients. C. Richard et al. Clin Cancer Res. 2019 Feb 1;25(3):957-966.
- Gut microbiome influences efficacy of PD-1-based immunotherapy against epithelial tumors. B. Routy et al. Science. 2018 Jan 5;359(6371):91-97.